{"id":1529,"date":"2015-09-18T17:43:56","date_gmt":"2015-09-18T15:43:56","guid":{"rendered":"http:\/\/bioinfo2.ugr.es\/CpGislandDB\/?page_id=1529"},"modified":"2015-09-18T17:43:56","modified_gmt":"2015-09-18T15:43:56","slug":"publications","status":"publish","type":"page","link":"https:\/\/alu.ugr.es\/bioinfo\/cpgislanddb\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p>Hackenberg M, Previti C, Luque-Escamilla PL, Carpena P, Mart\u00ednez-Aroza J, Oliver JL. 2006.<br \/>\nCpGcluster: A distance-based algorithm for CpG-island detection.<br \/>\n<strong>BMC Bioinformatics 7: 446<\/strong><br \/>\n<a href=\"http:\/\/dx.doi.org\/10.1186\/1471-2105-7-446\" target=\"_blank\">http:\/\/dx.doi.org\/10.1186\/1471-2105-7-446<\/a><br \/>\n<a href=\"https:\/\/github.com\/bioinfoUGR\/cpgcluster\" target=\"_blank\">GitHub repository<\/a><\/p>\n<p>Michael Hackenberg, Guillermo Barturen, Pedro Carpena, Pedro L. Luque Escamilla, Christopher Previti, Jos\u00e9 L. Oliver. 2010.<br \/>\nPrediction of CpG-island function: CpG clustering vs. sliding-window methods<br \/>\n<strong>BMC Genomics 2010, <strong>11:<\/strong>327<\/strong><strong><br \/>\n<\/strong><a href=\"http:\/\/dx.doi.org\/10.1186\/1471-2164-11-327\">http:\/\/dx.doi.org\/10.1186\/1471-2164-11-327<\/a><\/p>\n<p>Michael Hackenberg, Pedro Carpena, Pedro Bernaola-Galv\u00e1n, Guillermo Barturen, \u00c1ngel M. Alganza and Jos\u00e9 L. Oliver. 2011.<br \/>\nWordCluster: detecting clusters of DNA words and genomic elements<br \/>\n<strong>Algorithms for Molecular Biology<\/strong> <strong>6<\/strong><strong>:<\/strong>2<br \/>\n<a href=\"http:\/\/dx.doi.org\/10.1186\/1748-7188-6-2\">http:\/\/dx.doi.org\/10.1186\/1748-7188-6-2<\/a><\/p>\n<p>Guillermo Barturen, Stefanie Geisen, Francisco Dios, E. J. Maarten Hamberg, Michael Hackenberg, and Jos\u00e9 L. Oliver. 2013. CpGislandEVO: A Database and Genome Browser for Comparative Evolutionary Genomics of CpG Islands.<br \/>\n<strong>BioMed Research International<\/strong>, vol. 2013, Article ID 709042, 6 pages, 2013. [<a href=\"http:\/\/downloads.hindawi.com\/journals\/bmri\/2013\/709042.pdf\" target=\"_blank\">PDF<\/a>].<br \/>\n<a href=\"http:\/\/dx.doi.org\/10.1155\/2013\/709042\" target=\"_blank\">http:\/\/dx.doi.org\/10.1155\/2013\/709042<\/a><\/p>\n<p>Dios F., G. Barturen, R. Lebr\u00f3n, A. Rueda, M. Hackenberg and J.L. Oliver. 2014. DNA clustering and genome complexity. <strong>Computational Biology and Chemistry: <\/strong><a href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S1476927114000905\" target=\"_blank\">http:\/\/www.sciencedirect.com\/science\/article\/pii\/S1476927114000905<\/a><br \/>\n<a href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S1476927114000905\" target=\"_blank\"><span class=\"S_C_dd&lt;br&gt;Doi\">DOI: 10.1016\/j.compbiolchem.2014.08.011<\/span><\/a><a title=\"GenomeCluster code\" href=\"https:\/\/github.com\/bioinfoUGR\/genomecluster\" target=\"_blank\"><br \/>\nGitHub repository<\/a><\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Hackenberg M, Previti C, Luque-Escamilla PL, Carpena P, Mart\u00ednez-Aroza J, Oliver JL. 2006. CpGcluster: A distance-based algorithm for CpG-island detection. BMC Bioinformatics 7: 446 http:\/\/dx.doi.org\/10.1186\/1471-2105-7-446 GitHub repository Michael Hackenberg, Guillermo Barturen, Pedro Carpena, Pedro L. Luque Escamilla, Christopher Previti, Jos\u00e9 L. Oliver. 2010. Prediction of CpG-island function: CpG clustering vs. sliding-window methods BMC Genomics 2010, [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-1529","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/alu.ugr.es\/bioinfo\/cpgislanddb\/wp-json\/wp\/v2\/pages\/1529","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/alu.ugr.es\/bioinfo\/cpgislanddb\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/alu.ugr.es\/bioinfo\/cpgislanddb\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/alu.ugr.es\/bioinfo\/cpgislanddb\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/alu.ugr.es\/bioinfo\/cpgislanddb\/wp-json\/wp\/v2\/comments?post=1529"}],"version-history":[{"count":0,"href":"https:\/\/alu.ugr.es\/bioinfo\/cpgislanddb\/wp-json\/wp\/v2\/pages\/1529\/revisions"}],"wp:attachment":[{"href":"https:\/\/alu.ugr.es\/bioinfo\/cpgislanddb\/wp-json\/wp\/v2\/media?parent=1529"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}